user: anonymous
This program will run in the CGRB Job Queue
Program blastntblastntblastxblastp Database Brachypodium 8x release Brachypodium 8x release proteins Brachypodium 8x release CDS Brachypodium 8x release genes Brachypodium 8x 454 ESTs Brachypodium 8x Sanger ESTs Brachypodium 8x Sanger & 454 ESTs Brachypodium 8x TAU genes Brachypodium 8x TAU proteins Brachypodium 8x TAU CDS Brachypodium 8x TAU cDNAs Brachypodium 8x TAU introns Brachypodium Draft Genome JGI 4X WGS Traces
Enter data as Sequence in FASTA format Accession or GI Or load it from disk
Expect 0.0001 0.01 1 10 100 1000 Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45 Perform ungapped alignment
Query Genetic Codes (blastx only) Standard (1) Vertebrate Mitochondrial (2) Yeast Mitochondrial (3) Mold Mitochondrial; ... (4) Invertebrate Mitochondrial (5) Ciliate Nuclear; ... (6) Echinoderm Mitochondrial (9) Euplotid Nuclear (10) Bacterial (11) Alternative Yeast Nuclear (12) Ascidian Mitochondrial (13) Flatworm Mitochondrial (14) Blepharisma Macronuclear (15) Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF
Limit search to results of Entrez query
Other advanced options: Show Tax Blast reports