  <body>
<br />
<table width="100%"  border="0" cellspacing="0" cellpadding="0">
  <tr>
    <td height="44"></td>
    <td width=991>

<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
<html xmlns="http://www.w3.org/1999/xhtml" lang="en" xml:lang="en">
<head>
  <title>
Brachypodium Distachyon Blast tool  </title>
  <link type="text/css" rel="stylesheet" href="http://www.brachybase.org/blast/theme/style.css" />
  <style type="text/css">
  </style>

  <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />

<base href="http://www.brachybase.org/blast/" />
<style type="text/css" media="all">
@import url(layout.css);
</style>

</head>
    	<table border="0" cellpadding="0" cellspacing="0" id="header">
    <tr>
      	<td id="menu">
        	<div id="primary"></div>
     	</td>
      	<td id="logo">
        	<a href="./"><IMG SRC="images/brachypodium_logo.gif" BORDER=0></a>
      	</td>
    </tr>
    <tr>
	<td colspan="2">
		<div id="secondary">
		</div>
	</td>
    </tr>
</table>

 	<table border="0" cellpadding="0" cellspacing="0" id="content">
	<td id="sidebar-left">
                <div id="blocks"><div class="block block-menus" id="block-menus-1">

       	
<h2 class="title"><fieldset id=\"my_menu\" width="165px"><legend><font style="font-size: 16px;"><b>Main Menu</b></font></legend><div class="menus-description"></div>
<div class="menu menus-menu">
<ul>
<li class="leaf"><a href="/">Home</a></li>
<li class="leaf"><a href="docs/newoptions.html">Options Info</a></li>
</ul>

</div>

</h2>
      <div class="content"></fieldset></div><br>
   </div>

                
</div></div>
                </td>
      <td valign="top" id="content">
  <div id="slogan"></div>
  <div id="main">
    <div class="node ">
      <h2 class="main-title">
<b></b>      </h2>
      <span class="submitted"></span>

      <div class="content">
/* $Id: style.css,v 1.13 2006/04/03 22:20:48 unconed Exp $ */

/*
** HTML elements
*/
body {
  margin: 0;
  padding: 0;
  color: #dcd8ce;
  /* background-color: #fff; */
  background-color: #dcd8ce;
  font: 76% Verdana, Arial, Helvetica, sans-serif;
}
tr.odd td, tr.even td {
  padding: 3px;
}
h1, h2, h3, h4, h5, h6 {
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}
/*
h1 {
  font-size: 1.3em;
}
h2 {
  font-size: 1.2em;
}
h3, h4, h5, h6 {
  font-size: 1.1em;
}
*/
/*  headers  */
h1
{
        unicode-bidi:embed;
        display:block;
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        margin-left:0;
        margin-bottom:0;
        font-family:'arial','helvetica',sans-serif;
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}
h2
{
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}

h3 {
        unicode-bidi:embed;
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        font-weight:600;
}
/* White font with minimal spacing. */
h3.style1 {
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h4
{
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h5
{
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p {
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a {
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a:link {
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a:visited {
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a:active {
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fieldset {
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pre {
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table.fancy {
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table.fancy td {
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table.fancy td h4 {
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table.announce {
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td.title {
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.form-item label {
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}
.links {
  margin-bottom: 0px;
}
.comment .links {
  margin-bottom: 0px;
}

/*
** Page layout blocks / IDs
*/
#header, #content {
  width: 100%;
}
#header {
  /* background-color: #69c; */
  background-color: #375998;
  padding: 0px 0px 0px 0px;
}
#header2, #content {
  width: 100%;
}
#header2 {
  background-color: #000000;
}
#logo {
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  border: 0;
}
#logo img {
  float: left;
  padding: 5px 15px 5px 15px;
  border: 0;
}
#locallogo {
  vertical-align: middle;
  border: 0;
}
#locallogo img {
  float: center;
  padding: 0px 10px 0px 10px;
  border: 0;
  margin-left: 50px;
}
#menu {
  padding: 5px 5px 00px 5px;
  text-align: right;
  vertical-align: middle;
}
#primary {
  font-size: 10px;
  padding: 0px 8px 15px 0px;
  color: #9cf;
}
#primary a:link {
  font-weight: bold;
   color:#fff;
}
#primary a:visited {
  font-weight: bold;
  color:#fff;
}
#primary a:hover {
  font-weight: bold;
  color:#fdba00;
  text-decoration: none;
}
#primary a:active {
  font-weight: bold;
  color:#fff;
}
#secondary {
  background: url(/images/secondary_bg_gold.gif) no-repeat;
  background-color:#000;
  padding: 3px 20px 2px 0px;
  font-size: 1em;
  clear:both;
  height:18px;
  color: #fff;
  text-align:right;
}
#secondary a:link {
  font-weight: bold;
   color: #fff;
}
#secondary a:visited {
  font-weight: bold;
  color: #fff;
}
#secondary a:hover {
  font-weight: bold;
  color:#fdba00;
  text-decoration: none;
}
#secondary a:active {
  font-weight: bold;
  color: #fff;
}
#search {
  vertical-align: top;
}
#search table {
  vertical-align: top;
}
#search .form-text, #search .form-submit {
  border: 1px solid #369;
  font-size: 11px;
  height: 15px;
  vertical-align: middle;
}
#search .form-text {
  width: 105px;
  padding: 0px 0px 0px 0px;
}
#mission {
  background-color: #375998;
  padding: 15px 20px;
  font-size: 14px;
  color: #fff;
}
#mission a, #mission a:visited {
  color: #9cf;
  font-weight: bold;
}
.site-name {
  margin: 10px 0px 10px 20px;
  padding: 0px;
  font-size: 30px;
}
.site-name a:link, .site-name a:visited {
  color: #fff;
}
.site-name a:hover {
  color: #369;
  text-decoration: none;
}
.site-slogan {
  font-size: 10px;
  color: #eee;
  display: block;
  margin: 0px 0px 0px 0px;
  font-style: italic;
  font-weight: bold;
}
#main {
  /* padding in px not ex because IE messes up 100% width tables otherwise */
  padding: 10px;
  width: 740px; /* Need to size body for IE */
}
#mission, .node .content, .comment .content {
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}
#help {
  font-size: 9px;
  margin-bottom: 10px;
}
.breadcrumb {
  margin-bottom: 5px;
  font-size: 11px;
}
.messages {
  background-color: #eee;
  border: 1px solid #ccc;
  padding: 3px;
  margin-bottom: 10px;
}
.error {
  border-color: red;
}
#right-border {
  background-image:url(right_mid.jpg);
  background-repeat: repeat-y;
  vertical-align: top;
}
#bottom-border {
  padding: 0px 0px 0px 0px;
  background-image:url(/images/bottom_mid.jpg);
  background-repeat: repeat-x;
  background-color:#efefef;
  width: 100%;
}
#bottom-border-right {
  padding: 0px 0px 0px 0px;
  background-image:url(/images/bottom_mid.jpg);
  background-repeat: repeat-x;
  background-color:#efefef;
  width: 100%;
}
#right-border {
  background-image:url(/images/right_mid.jpg);
  background-repeat: repeat-y;
  vertical-align: top;
  background-color:#efefef;
  width: 8px;
}
#side-left {
  background-color:#fdba00;
  width: 15px;
  height: 668px;
}
#side-right {
  background-color:#fff;
  width: 15px;
  height: 668px;
}
#sidebar-left {
  /* font-family:'verdana','geneva','arial','helvetica',sans-serif; */
  /* font-size:.8em; */
  background:#687998;
  width: 165px;
  /* padding in px not ex because IE messes up 100% width tables otherwise */
  padding: 5px;
  vertical-align: top;
  line-height:18px;
}
#sidebar-right {
  /* font-family:'verdana','geneva','arial','helvetica',sans-serif; */
  /* font-size:.8em; */
  background:#687998;
  width: 165px;
  /* padding in px not ex because IE messes up 100% width tables otherwise */
  padding: 5px;
  vertical-align: top;
  line-height:18px;
}
#sidebar-right a:link {
   color:#000000;
}
#sidebar-right a:visited {
  color:#000000;
}
#sidebar-right a:hover {
  color:#fdba00;
  text-decoration: none;
}
#sidebar-right a:active {
  color:#4c5c5c;
}
#sidebar-right ul li {
  /*border-bottom:2px dotted #fec;*/
  color:#69f;
}
#sidebar-left a:link {
   color:#000000;
}
#sidebar-left a:visited {
  color:#000000;
}
#sidebar-left a:hover {
  color:#fdba00;
  text-decoration: none;
}
#sidebar-left a:active {
  color:#4c5c5c;
}
#sidebar-left ul li {
  /*border-bottom:2px dotted #fec;*/
  color:#69f;
}
/*
#sidebar-left ul li ul li.leaf a
{
  color:#666;
}
*/
#sidebar-left ul li ul li.leaf a:link {
  color:#666;
}
#sidebar-left ul li ul li.leaf a:visited {
  color:#666;
}
#sidebar-left ul li ul li.leaf a:hover {
  color:#369;
  text-decoration: none;
}
#sidebar-left ul li ul li.leaf a:active {
  color:#4c5c5c;
}
#sidebar-left ul li ul li.leaf {
  /*border-bottom:2px dotted #fda;*/
  /* border-bottom:none; */
  color:#69f;
}

/*  quick links  */
div#quick_links
{
  background-color: #fda;
  margin:0 0 0 0;
  padding:4px;
  padding-left:0px;
  border:0px;
}

#footer {
  background-color: #375998;
  padding: 5px 0px 5px 0px;
  color: #fff;
  font-size: 12px;
  height: 20px;
  text-align: center;
  line-height:12px;
}
#footer a:link {
   color:#fff;
}
#footer a:visited {
  color:#fff;
}
#footer a:hover {
  color:#fdba00;
  text-decoration: none;
}
#footer a:active {
  color:#fff;
}

div.orangeline { clear:both; width:100%; background-color:#C50; height:9px; }

/* Dotted line. */
div.dotted
{
  margin-top: 0px;
  margin-bottom: 0px;
  margin-left: 0px;
  margin-right: 0px;
  padding: 0px 0px 0px 0px;
  border-bottom:2px dotted #cccccc;
  color:#cccccc;
}

/*
** Common declarations for child classes of node, comment, block, box, etc.
** If you want any of them styled differently for a specific parent, add
** additional rules /with only the differing properties!/ to .parent .class.
** See .comment .title for an example.
*/
.title, .title a {
  font-weight: bold;
  font-size: 13px;
  /* color: #777; */
  color: #2554ab;
  margin: 0 auto 0 auto;  /* decrease default margins for h<x>.title */
}
.submitted {
  color: #999;
  font-size: 8px;
}
.links {
  color: #999;
}
.links a {
  font-weight: bold;
}
/* IE on Macs defaults block color to yellow. Need to specify. */
.block, .box {
  padding: 0px 0px 0px 0px;
 /* background:#d9d9e3;  /* for IE on Mac */
  background:#687998;  /* for IE on Mac STYLETAG */
 }
.block {
  border-top: 0px solid #bbb;
  border-bottom: 0px solid #bbb;
  border-right: 0px solid #bbb;
  border-left: 0px solid #bbb;
  padding-bottom: 8px;
  margin-bottom: 15px;
  font: 76% trebuchet MS;
  font-weight: bold;
  font-size: 13px;
}
.block .title {
  margin-bottom: 2px;
  padding: 0px 0px 0px 0px;
  font: 76% trebuchet MS;
  font-weight: bold;
  font-size: 18px;
  text-align: center;
}
.box .title {
  font-size: 11px;
}
.node {
  margin: 5px 0px 20px 0px;
}
.sticky {
  padding: 5px;
  background-color: #eee;
  border: solid 1px #ddd;
}
.node .content, .comment .content {
  margin: 5px 0px 5px 0px;
}
.node .taxonomy {
  color: #999;
  font-size: 10px;
  padding: 0px; /* To remove indent at body start */
}
.node .picture {
  border: 1px solid #ddd;
  float: right;
  margin: 5px;
}
.comment {
  border: 1px solid #abc;
  padding: 5px;
  margin-bottom: 10px;
}
.comment .title a {
  font-size: 11px;
  font-weight: normal;
}
.comment .new {
  text-align: right;
  font-weight: bold;
  font-size: 8px;
  float: right;
  color: red;
}
.comment .picture {
  border: 1px solid #abc;
  float: right;
  margin: 5px;
}

/*
** Module specific styles
*/
#aggregator .feed-source {
  background-color: #eee;
  border: 1px solid #ccc;
  padding: 10px;
  margin: 10px 0px 10px 0px;
}
#aggregator .news-item .categories, #aggregator .source, #aggregator .age {
  color: #999;
  font-style: italic;
  font-size: 9px;
}
#aggregator .title {
  margin-bottom: 5px;
  font-size: 10px;
}
#aggregator h3 {
  margin-top: 10px;
}
#forum table {
  width: 100%;
}
#forum td {
  padding: 5px 5px 5px 5px;
}
#forum td.forum, #forum td.posts {
  background-color: #eee;
}
#forum td.topics, #forum td.last-reply {
  background-color: #ddd;
}
#forum td.container {
  background-color: #ccc;
}
#forum td.container a {
  color: #555;
}
#forum td.statistics, #forum td.settings, #forum td.pager {
  height: 15px;
  border: 1px solid #bbb;
}
#forum td .name {
  color: #96c;
}
#forum td .links {
  padding-top: 7px;
  font-size: 9px;
}
#profile .profile {
  clear: both;
  border: 1px solid #abc;
  padding: 5px;
  margin: 10px 0px 10px 0px;
}
#profile .profile .name {
  padding-bottom: 5px;
}
.block-forum h3 {
  margin-bottom: 5px;
}
.calendar a {
  text-decoration: none;
}
.calendar td, .calendar th {
  padding: 4px 0px;
  border-color: #888;
}
.calendar .day-today {
  background-color: #69c;
}
.calendar .day-today a {
  color: #fff;
}
.calendar .day-selected {
  background-color: #369;
  color: #fff;
}
.calendar .header-week {
  background-color: #ccc;
}
.calendar .day-blank {
  background-color: #ccc;
}
.calendar .row-week td a:hover {
  background-color: #fff; color: #000;
}

/*  buffer class  */
div.t_buffer_class
{
	margin-left:auto;
	margin-right:auto;
	width:994px;
	/* width:850px; */
}

/*  wrapper (div#nav, div#content_container, div#content, div#breadcrumbs, div#anchors)  */
div#t_wrapper
{
	/* background-image:url(https://secure.oregonstate.edu/cws_templates/images/misc/t_navbg.jpg); */
	background-repeat:repeat-y;
	background-position:left;
	background-color:#fff;
	line-height:14px;
	margin:0;
	padding:0;
}
.menu {
  padding: 0em 0em 1em 0em;
  width: 130px;
}
.menu ul {
  list-style: none;
  margin: 0;
  padding: 2px 0px 0em 1em;
  border: none;
  text-align: left;
}
.menu li a {
  text-align: left;
  display: block;
  text-decoration: none;
  padding: 2px 0px 1px 0px;
  background-repeat: no-repeat;
}
      	      </div>
    </div>
        </div><!-- main -->    </td>
    <td id="sidebar-right">

    <!--<div class="block block-block" id="block-block-2">
      <h2 class="title"></h2>
      <div class="content"><IMG SRC="images/brachypodium_logo.gif" ></div><br>

   </div>--!>

    <div class="block block-menus" id="block-menus-3">
      <h2 class="title"><fieldset id="my_menu"><legend><font style="font-size: 16px;"><b>Links</b></font></legend><div class="menus-description">

</div>
<div class="menu menus-menu">

       	
<ul>
<li class="leaf"><a href="http://www.brachybase.org/">BrachyBase</a></li>
<li class="leaf"><a href="http://www.brachypodium.org/">Brachypodium.org</a></li>
<li class="leaf"><a href="http://www.cgrb.oregonstate.edu/">CGRB</a></li>
<li class="leaf"><a href="http://mocklerlab.cgrb.oregonstate.edu">Mockler Lab</a></li>
</ul>

       	</div>
</h2>
      <div class="content"></fieldset></div><br>
   </div>

    </td>
    </tr>
</table>
  <div id="secondary"></div>


<div id="footer">
    <center><font color="#000000" size="2">©Copyright 2007. Oregon State University, All rights reserved. Contact: <a href="mailto:mockler-webmaster@cgrb.oregonstate.edu"><font color="#000000">Webmaster</font></a> <br /><font color="#000000" size="2"> </font></font></center><br>
  </div>
    </td>
    <td width="8" id="right-border"><img src="images/right_top.jpg" width="8" height="21" align="top" /></td>
    <td>&nbsp;</td>
  </tr>

  <tr>
    <td height="10">&nbsp;</td>
    <td height="10" id="bottom-border"><img src="images/bottom_left.jpg" width="19" height="20" /></td>
    <td width="8" height="10"><img src="images/bottom_right.jpg" width="8" height="20" /></td>
    <td height="10">&nbsp;</td>
  </tr>
</table>
</body>
</html>


